Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399398.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2664.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13190

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2603--2919
172
1.8
172
83
5
417
36
14
12
35
1.85
5699--8415
171
15.9
169
72
9
1476
39
12
12
34
1.81
5718--8415
685
3.9
681
75
7
1759
39
12
12
34
1.81
7621--8246
169
3.7
167
79
7
480
40
11
11
35
1.78
8516--10720
171
12.8
171
72
10
1139
34
13
11
38
1.81

Tables:   1

The End!