Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397468.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1699.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14891

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1484--1749
140
1.9
140
86
0
379
35
13
10
40
1.78
1803--3228
170
8.3
171
80
4
1364
35
12
12
39
1.81
1897--3235
342
3.9
340
80
4
1470
35
13
12
38
1.82
3482--4910
171
8.4
170
79
4
1432
36
13
12
37
1.82
4865--4944
39
2.1
39
85
2
108
38
8
7
45
1.64
4903--5420
171
3.0
170
77
8
519
34
13
11
38
1.81
6864--7241
168
2.2
167
79
3
398
36
12
9
38
1.77
8432--9501
171
6.3
170
80
4
1093
35
13
12
38
1.82
8433--9501
340
3.1
340
81
4
1204
35
13
12
38
1.82
10311--12216
171
11.2
168
75
6
1246
35
13
11
37
1.82
10841--12216
340
4.0
336
80
6
1405
35
13
12
38
1.82
13487--14005
169
3.1
169
81
7
574
39
10
14
35
1.81

Tables:   1

The End!