Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399404.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2670.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8060

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301--1714
170
8.3
170
79
5
1273
36
13
12
37
1.82
343--1727
171
8.1
170
79
5
1319
36
13
11
37
1.82
343--1715
341
4.0
339
80
5
1374
36
13
11
37
1.82
1738--3787
849
2.4
846
83
2
2486
34
13
12
37
1.82
1738--3787
336
6.0
333
75
8
1389
34
13
12
37
1.82
1738--3787
171
12.1
168
76
7
1509
34
13
12
37
1.82
5216--7122
171
11.2
168
80
5
1755
35
13
12
38
1.83
5216--7122
512
3.7
507
82
4
2052
35
13
12
38
1.83

Tables:   1

The End!