Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397469.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4188.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14865

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138--568
170
2.5
170
78
4
456
34
14
9
39
1.79
956--4412
171
20.3
169
73
7
1358
34
13
11
37
1.81
776--4413
343
10.7
340
73
7
1989
34
13
11
37
1.81
5004--5271
143
1.9
142
82
3
333
37
11
12
38
1.80
5328--5661
171
2.0
161
75
13
166
34
13
14
38
1.84
5125--8252
170
18.3
170
75
6
2103
35
13
12
37
1.82
5125--14864
341
28.5
341
70
5
3902
33
12
11
35
1.80
5125--14864
510
19.0
507
69
5
3207
33
12
11
35
1.80
8561--14865
171
37.1
171
73
6
2848
34
13
12
36
1.81
9025--14704
512
11.1
507
73
6
2567
35
13
12
36
1.82
14556--14863
170
1.9
160
86
2
357
35
13
13
34
1.84

Tables:   1

The End!