Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399418.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2685.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6976

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1139
171
6.6
169
81
5
1234
37
13
14
35
1.85
1--1115
342
3.3
340
82
6
1446
37
13
14
35
1.85
2389--2985
172
3.5
169
78
5
527
38
11
13
35
1.80
3179--4473
171
7.6
170
81
5
1394
34
14
12
37
1.85
3179--4473
343
3.8
341
82
4
1461
34
14
12
37
1.85
4971--6034
149
7.0
149
75
11
945
35
15
12
35
1.86
5119--6549
321
4.5
321
80
8
1319
35
15
13
35
1.86
5268--5588
172
1.9
172
91
1
527
36
15
12
35
1.84
4910--6549
470
3.4
468
81
9
1614
35
15
12
35
1.86
5891--6580
172
4.0
170
80
5
744
34
14
13
36
1.85

Tables:   1

The End!