Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399421.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2688.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3281

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225--546
171
1.9
171
83
4
427
36
13
11
39
1.81
769--1445
171
4.0
169
79
5
738
35
15
11
38
1.84
811--1445
343
1.9
342
87
3
936
34
15
11
37
1.85
1604--1917
171
1.8
171
86
1
459
36
11
11
40
1.78
2124--3042
171
5.4
170
82
5
989
35
13
12
39
1.82
2124--3042
341
2.7
342
81
4
1059
35
13
12
39
1.82

Tables:   1

The End!