Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397472.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2358.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14684

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117--7824
341
22.6
340
68
9
1392
36
11
13
33
1.82
117--1082
171
5.6
171
75
6
677
36
12
14
34
1.84
1482--7840
171
37.4
169
71
7
2889
37
11
13
33
1.82
5466--7843
512
4.6
507
77
6
1961
38
12
14
34
1.83
5530--7843
341
6.8
338
77
5
1959
38
12
14
34
1.83
5034--7817
683
4.1
676
76
7
2160
38
12
13
34
1.83
8481--9375
170
5.2
171
76
4
775
35
12
15
34
1.86
9646--13584
171
23.1
171
79
5
3392
38
12
14
35
1.83
13129--14024
451
2.0
453
80
5
1010
38
12
14
33
1.84
13581--14684
170
6.5
170
77
6
912
38
12
14
34
1.84
13583--14684
343
3.2
341
79
5
1109
38
12
14
34
1.84
14531--14570
21
2.0
20
85
5
53
22
10
17
50
1.76
14531--14570
20
2.0
21
85
5
55
22
10
17
50
1.76

Tables:   1

The End!