Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399467.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_273.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43588

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8693--9186
171
3.0
161
78
7
370
37
11
13
35
1.82
8909--9292
170
2.3
171
81
5
438
40
12
13
34
1.81
9333--10154
171
4.8
168
73
6
521
36
11
13
34
1.80
10414--11379
339
2.8
337
79
6
1094
35
13
11
39
1.81
10279--11359
171
6.4
169
74
9
824
35
13
11
39
1.81
11537--12187
170
3.8
168
74
5
583
38
11
13
33
1.81
11620--12254
341
1.9
341
79
5
737
37
11
14
35
1.82
12572--13391
169
4.8
168
72
10
545
39
9
13
37
1.76
13627--14197
174
3.3
172
78
4
632
36
9
16
34
1.81
14829--15801
170
5.7
170
77
6
854
39
10
14
36
1.79
14897--15801
343
2.6
342
81
4
918
39
9
14
36
1.79
19974--21368
170
8.2
170
79
5
1397
39
10
14
35
1.81
19974--21375
341
4.1
336
80
6
1348
39
10
14
35
1.81
22362--24294
170
11.3
168
78
7
1715
39
11
13
35
1.81
22362--24294
341
5.7
340
81
5
2115
39
11
13
35
1.81
32194--32968
170
4.5
170
76
6
665
35
14
11
37
1.83
40662--41252
170
3.5
170
79
7
628
34
14
12
38
1.83
41733--42303
170
3.4
168
71
9
469
37
11
14
35
1.82

Tables:   1

The End!