Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397475.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_372.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14343

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
116--156
16
2.3
18
84
16
50
60
0
7
31
1.24
492--804
169
1.9
159
83
6
321
37
11
15
33
1.83
207--1333
171
6.6
168
72
8
592
37
11
13
33
1.81
205--1333
341
3.3
330
73
11
714
37
11
13
33
1.81
2434--3122
172
4.0
172
75
5
565
40
12
12
33
1.81
3227--5251
172
11.8
170
77
5
1571
34
13
11
39
1.80
3234--5101
685
2.7
684
78
6
1722
35
13
11
39
1.80
3227--5244
513
3.9
511
77
5
1669
34
13
11
39
1.80
7385--7954
170
3.4
168
78
7
562
35
12
11
38
1.80
8133--14343
171
36.1
170
71
7
2878
34
12
11
36
1.80
8133--13580
514
10.6
509
71
7
1765
34
12
11
36
1.80
8152--13593
341
15.9
342
73
5
2521
34
12
11
36
1.80
11894--13597
853
2.0
845
80
6
1913
36
13
11
37
1.81
14036--14077
21
2.0
21
95
0
75
45
19
16
19
1.86

Tables:   1

The End!