Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399481.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2743.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28096

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
910--1272
171
2.1
171
76
2
379
33
15
11
34
1.83
2027--2634
170
3.6
170
73
9
538
35
13
13
37
1.83
2735--9234
171
38.1
170
79
5
5695
36
13
11
38
1.82
2735--9234
341
19.1
339
79
7
5684
36
13
11
38
1.82
8249--8280
14
2.3
14
100
0
64
34
31
0
34
1.58
12771--15020
171
13.2
172
79
6
1986
36
13
12
38
1.81
12771--15020
342
6.6
341
80
5
2261
36
13
12
38
1.81
15674--17324
171
9.7
171
82
4
1805
37
12
11
38
1.80
15674--17291
514
3.2
509
84
4
2058
37
12
11
38
1.80
21503--21828
171
2.0
161
77
9
316
37
11
11
36
1.78
22067--26416
171
25.5
170
75
4
3087
37
11
13
34
1.82
26537--28094
340
4.6
337
78
6
1430
37
12
13
36
1.82
26537--28094
171
9.1
171
79
4
1457
37
12
13
36
1.82
22067--28094
511
11.7
501
71
8
2131
36
11
13
34
1.81
27788--27827
21
2.0
21
90
5
64
32
7
12
47
1.69

Tables:   1

The End!