Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397476.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1694.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14238

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185--492
170
1.9
161
86
2
359
34
12
13
36
1.82
340--652
172
1.9
161
82
7
321
35
11
12
37
1.80
2472--5778
171
19.6
170
74
8
2254
38
12
12
34
1.81
3526--5778
683
3.3
679
78
7
1872
39
11
13
35
1.81
3129--5778
515
5.2
512
75
8
1549
38
12
12
34
1.81
5438--5729
155
1.9
154
85
5
410
40
13
13
32
1.83
9955--11123
171
6.9
171
76
8
964
34
13
12
39
1.82
13428--14238
170
4.7
171
78
6
686
36
13
10
40
1.79
13588--14234
342
1.9
342
81
3
784
37
12
9
40
1.76

Tables:   1

The End!