Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399499.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_276.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24747

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
401--1273
343
2.5
342
79
3
896
35
13
11
38
1.81
401--1275
171
5.1
170
78
4
794
35
13
11
38
1.81
2638--3083
170
2.6
166
80
7
511
36
14
10
39
1.80
4716--5054
172
2.0
171
81
7
393
34
13
13
38
1.84
5374--7066
172
9.9
171
73
6
1032
35
11
11
38
1.78
13389--13744
172
2.1
172
83
1
453
39
10
14
36
1.79
14716--15257
171
3.2
171
82
0
681
40
11
11
32
1.77
17161--17719
173
3.3
165
74
12
466
36
14
11
38
1.81
19674--19993
171
1.9
161
80
9
367
35
12
12
36
1.81
22991--23313
170
1.9
162
81
7
380
37
15
12
32
1.84
22814--24747
172
11.3
169
73
7
684
37
12
12
34
1.80

Tables:   1

The End!