Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397478.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_289.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14205

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--1987
170
7.4
171
71
11
463
40
10
14
34
1.79
975--1253
152
1.8
150
86
3
398
41
9
13
35
1.78
1127--1996
340
2.6
340
81
5
979
39
10
14
35
1.80
1135--1996
170
5.1
169
79
4
815
39
10
14
35
1.80
3917--5715
170
10.6
169
79
4
1564
40
10
13
35
1.79
3917--5795
680
2.8
672
76
9
1808
40
10
13
35
1.79
5863--5935
21
3.5
20
71
17
67
35
10
12
41
1.78
7170--7201
16
2.0
16
93
0
55
71
0
0
28
0.86
7333--10319
170
17.6
169
74
8
1570
34
13
10
39
1.79
7332--12416
340
14.8
334
72
9
2634
34
13
10
38
1.79
8964--9598
339
1.9
329
79
7
706
32
11
12
39
1.79
7331--12379
509
9.8
504
72
9
2531
34
13
10
38
1.79
10609--10646
20
1.9
20
94
0
67
47
7
5
39
1.55
10430--12449
170
11.9
169
79
6
1735
35
13
10
40
1.79
13039--13476
170
2.5
173
80
5
469
35
13
11
39
1.80

Tables:   1

The End!