Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397479.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4132.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14077

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3091
171
18.1
170
71
8
921
34
13
12
38
1.82
1--3091
513
6.0
506
74
7
1698
34
13
12
38
1.82
1--3091
342
9.1
339
74
6
1951
34
13
12
38
1.82
3674--6754
171
18.1
170
74
6
1920
35
12
12
39
1.81
3604--6754
341
9.2
340
75
7
2048
34
12
12
38
1.81
3825--6754
512
5.7
512
75
8
1247
35
11
12
39
1.80
7681--8150
172
2.7
171
76
8
565
40
13
12
34
1.82
8394--10352
171
11.4
173
74
8
685
39
13
13
33
1.84
8251--10352
342
6.1
341
78
3
1672
38
13
14
34
1.85
8392--10010
683
2.4
680
81
3
1813
38
13
13
34
1.84
9413--10351
512
1.8
513
82
1
1202
39
13
13
32
1.85
8392--10348
683
2.9
682
79
3
1671
39
13
13
33
1.84
11255--12965
170
10.0
169
75
5
1144
35
12
12
39
1.80
11255--12965
341
5.0
342
78
4
1378
35
12
12
39
1.80
13184--14077
171
5.2
168
75
5
668
35
12
10
37
1.78

Tables:   1

The End!