Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399540.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2799.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7700

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1072
338
3.2
335
82
5
1262
35
12
11
40
1.81
4--1075
170
6.3
170
78
7
1002
35
12
11
40
1.80
1737--2469
170
4.3
169
76
5
508
34
13
11
38
1.81
1717--3153
341
4.2
338
76
4
1122
34
13
10
38
1.80
1725--3289
171
9.2
169
73
7
849
34
13
11
38
1.81
3897--4216
171
1.9
171
81
3
394
34
13
10
38
1.79
5166--7286
170
12.5
171
78
4
1796
35
13
12
39
1.82
5169--7286
341
6.2
340
78
5
1748
35
13
12
39
1.82

Tables:   1

The End!