Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399555.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2810.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16720

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--986
171
5.8
170
78
7
857
39
11
12
36
1.79
3132--5599
170
14.5
171
77
5
1861
34
14
11
39
1.81
5701--6012
170
1.8
170
87
2
466
35
13
9
41
1.77
6306--7133
344
2.4
346
85
4
1077
35
14
11
38
1.83
6306--7134
172
4.8
171
80
4
909
35
14
11
38
1.83
7758--8084
169
2.0
159
82
5
311
33
11
10
41
1.75
11186--11477
146
2.0
144
85
5
392
33
9
13
43
1.76
11332--13423
170
12.3
170
79
5
1741
34
13
11
39
1.82
11332--13410
511
4.1
510
79
5
1978
34
13
12
39
1.82
13754--16717
171
17.3
170
75
7
1782
34
13
11
39
1.81
15012--15041
12
2.5
12
100
0
60
16
23
10
50
1.75
13767--16720
343
8.6
343
75
7
1800
34
13
11
39
1.81

Tables:   1

The End!