Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399577.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2831.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5999

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
330--698
172
2.1
174
83
4
462
35
14
10
40
1.79
554--849
151
1.9
152
81
4
355
36
12
11
39
1.78
699--1881
171
6.9
168
77
8
964
36
14
10
39
1.80
330--1702
511
2.7
492
77
8
1327
36
14
10
39
1.80
699--1881
511
2.3
509
79
5
1274
36
14
10
39
1.80
3038--4403
172
8.0
170
72
5
862
34
14
11
36
1.81
3038--4403
171
8.0
169
73
5
772
34
14
11
36
1.81
3913--4219
169
1.9
158
76
12
296
34
14
11
36
1.81
4704--5999
172
7.6
168
79
6
1119
35
14
11
39
1.82
4686--5984
513
2.5
507
81
6
1492
35
14
11
38
1.82

Tables:   1

The End!