Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397486.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_638.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13174

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
746--1070
171
2.0
161
76
11
300
37
11
12
34
1.80
917--1352
170
2.6
160
76
10
322
34
13
12
35
1.81
3032--3083
21
2.5
21
93
0
95
36
13
17
32
1.89
3096--3804
171
4.1
166
74
5
449
36
11
14
35
1.82
4544--4869
171
2.0
163
82
6
322
35
12
12
35
1.82
4544--6583
170
12.0
170
70
6
853
36
11
12
34
1.80
5567--5882
169
1.9
162
81
2
305
37
12
12
34
1.80
5416--6066
341
1.9
321
79
8
617
37
10
12
35
1.78
6688--13174
171
37.9
171
73
5
3563
36
11
12
34
1.79
7198--8258
516
2.1
504
81
4
1050
39
10
12
34
1.78
9490--9964
172
2.8
162
80
7
434
37
12
11
36
1.80
11857--12179
168
2.0
161
81
5
307
36
13
12
34
1.82

Tables:   1

The End!