Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399586.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_284.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10935

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1704
171
3.2
171
80
3
537
36
12
13
35
1.83
3566--4577
171
5.9
171
84
4
1220
37
12
15
34
1.85
3566--4577
341
3.0
339
86
4
1304
37
12
15
34
1.85
5476--7097
171
9.5
171
85
2
1995
35
15
11
37
1.84
8271--8342
35
2.1
35
100
0
144
30
5
8
55
1.52
8601--9509
171
5.3
171
82
3
1026
35
12
15
35
1.85
8637--9509
344
2.5
341
85
3
1128
36
12
15
35
1.85
10355--10928
171
3.4
171
79
3
591
35
11
16
33
1.85

Tables:   1

The End!