Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399591.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2845.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9875

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--335
171
2.0
160
81
5
298
33
14
11
37
1.82
2182--2361
87
2.1
87
92
0
297
41
8
15
34
1.77
2453--2765
171
1.9
157
77
17
309
34
11
13
37
1.81
3527--3702
87
2.0
87
92
0
289
42
9
13
34
1.77
3908--4280
171
2.2
170
84
4
457
39
10
9
39
1.74
5935--6299
171
2.1
171
73
6
364
39
10
11
34
1.76
6623--6941
171
1.9
171
83
2
417
41
10
13
34
1.79
7436--8326
170
5.2
171
80
4
901
39
10
13
37
1.78
7450--8326
340
2.6
339
82
6
1015
39
10
13
37
1.78

Tables:   1

The End!