Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397487.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3364.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13094

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1040
170
6.1
170
76
5
769
35
13
11
37
1.81
2495--3255
171
4.5
171
81
4
720
35
14
12
37
1.84
3535--4036
169
3.0
167
83
4
560
37
13
11
38
1.81
8222--8553
172
2.0
162
83
2
335
34
12
11
38
1.79
7618--13094
171
31.9
168
69
7
1717
33
12
11
36
1.79
9633--10539
170
5.3
170
74
10
477
34
14
11
38
1.81
9462--13094
172
21.3
171
73
5
2030
34
12
11
38
1.79
12119--13094
504
1.9
502
84
1
1308
35
12
10
37
1.79

Tables:   1

The End!