Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397488.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2209.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13023

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1957--2810
172
5.0
174
76
5
601
37
12
12
33
1.81
2182--2810
171
3.7
169
80
4
489
37
12
13
34
1.82
2911--4433
174
8.9
169
74
5
919
36
10
13
35
1.80
2911--4135
172
7.2
169
76
4
591
36
10
13
35
1.80
4534--5031
172
2.9
164
79
8
439
36
11
13
33
1.82
6085--7158
172
6.3
171
79
5
1066
37
12
13
37
1.82
9682--11596
171
11.2
172
72
6
723
37
10
13
34
1.79
10092--11596
170
8.8
171
72
8
768
37
10
13
35
1.79
10181--10806
172
3.7
172
80
9
520
39
10
13
36
1.79

Tables:   1

The End!