Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397489.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2654.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12948

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1201--4715
170
20.7
170
78
6
3187
38
12
13
35
1.83
1201--4715
512
6.9
508
78
6
3195
38
12
13
35
1.83
4756--6754
171
11.8
170
79
5
1887
37
12
14
34
1.84
4766--6754
340
5.8
340
80
4
2032
37
12
14
34
1.84
4831--6754
510
3.8
509
83
4
2206
38
12
14
34
1.84
6855--7474
170
3.7
166
80
7
596
38
13
11
36
1.82
7474--7948
171
2.8
170
82
5
548
34
14
13
37
1.86
7868--8025
77
2.1
77
98
0
307
37
18
17
25
1.93
7747--8195
249
1.8
249
85
2
634
35
14
13
37
1.85
7957--8403
170
2.6
172
81
2
517
34
14
13
37
1.85
8465--8911
170
2.6
169
83
3
522
34
14
14
36
1.87
9335--11242
340
5.6
339
74
8
1220
35
14
11
36
1.82
9103--11242
171
12.6
169
73
7
1381
35
14
11
36
1.83
11343--12948
171
9.4
170
75
11
1075
36
13
11
38
1.81
11982--12019
17
2.2
17
95
0
67
36
15
7
39
1.77
11344--12946
509
3.1
495
78
11
1397
36
13
11
38
1.81

Tables:   1

The End!