Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399620.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2870.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8690

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
489--808
170
1.9
161
81
5
308
38
12
13
32
1.83
1460--5299
172
22.4
171
75
7
2682
38
12
13
35
1.82
1460--5299
515
7.5
508
77
7
2763
38
12
13
35
1.82
1461--5172
343
10.8
338
75
8
1729
38
12
13
35
1.83
7442--8690
171
7.3
170
77
4
1123
34
14
11
38
1.83
7442--8690
342
3.6
342
78
4
1330
34
14
11
38
1.83

Tables:   1

The End!