Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397495.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1127.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11881

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--2135
170
12.6
169
72
7
1252
34
12
11
36
1.80
10--4619
510
9.1
496
73
9
1718
35
12
11
37
1.79
1--9941
680
14.5
675
71
10
2466
35
13
11
37
1.80
1--1781
341
5.2
339
76
5
1190
33
13
11
37
1.80
1991--2261
140
1.9
141
82
5
343
39
8
11
40
1.71
2131--10204
171
46.9
171
71
8
3015
35
13
11
37
1.80
2131--4619
343
7.3
340
76
6
1665
35
12
10
38
1.78
5116--5386
137
2.0
138
80
6
309
37
11
10
39
1.77
5708--5764
28
2.0
28
100
0
114
47
14
21
17
1.82
10395--11881
171
8.7
169
74
5
1053
34
12
11
38
1.79
10395--11435
341
3.1
341
81
4
1046
35
12
11
39
1.81
10395--11703
512
2.6
508
79
5
1287
34
12
11
39
1.80

Tables:   1

The End!