Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399681.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2927.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12420

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17--1704
341
4.9
341
79
5
1413
35
13
10
39
1.79
15--1704
171
9.9
170
76
5
1358
35
13
10
39
1.80
5258--6920
171
9.8
171
77
4
1312
35
13
11
38
1.81
5236--6920
341
5.0
339
77
4
1522
35
12
11
38
1.81
7319--8317
171
5.8
171
76
7
735
35
12
12
40
1.80
7362--8139
344
2.3
340
82
4
904
35
11
11
40
1.79
9288--9840
171
3.2
167
82
5
655
37
11
13
37
1.81
9570--10106
271
2.0
271
80
2
614
37
12
14
35
1.85
9917--10226
171
1.8
171
81
6
387
39
13
12
34
1.83

Tables:   1

The End!