Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399688.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2933.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8371

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81--1079
171
5.8
172
77
6
847
35
13
11
38
1.80
1273--1969
170
4.1
169
79
4
713
34
15
10
39
1.82
1273--1969
341
2.0
340
82
3
839
34
15
10
39
1.82
2176--2633
234
2.0
234
86
2
643
36
14
13
35
1.85
2410--3532
171
6.6
171
79
5
1099
34
14
12
37
1.84
2409--3532
342
3.3
339
82
4
1226
34
14
12
37
1.84
5017--5933
170
5.4
169
73
8
595
33
12
12
40
1.81
5229--5933
335
2.1
337
78
6
723
33
12
13
41
1.82
6034--6391
168
2.1
169
83
4
445
39
13
12
34
1.82
7889--8371
171
2.8
170
80
5
535
40
12
13
33
1.82

Tables:   1

The End!