Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399690.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2935.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12847

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
865--2580
172
10.0
171
74
6
1099
35
14
11
37
1.81
5552--7603
171
12.0
170
79
5
1856
36
13
11
38
1.80
5552--7603
343
6.0
341
79
5
1896
36
13
11
38
1.80
8501--11314
343
8.2
340
79
5
2536
37
10
13
36
1.80
8499--11212
171
15.8
170
79
4
2570
38
10
13
36
1.80
8501--11212
516
5.2
513
82
4
2658
38
10
13
36
1.80

Tables:   1

The End!