Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397497.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2694.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11959

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--2180
171
12.8
171
78
5
1789
38
12
13
35
1.82
7--3189
342
9.4
340
77
7
2503
39
12
12
35
1.82
317--3189
673
4.2
657
78
9
2163
39
12
12
35
1.82
2255--3189
171
5.5
171
82
2
977
39
13
11
35
1.80
3103--3284
95
1.9
95
82
4
224
45
11
8
34
1.70
2757--3628
439
2.0
437
82
2
1068
39
13
11
35
1.80
3197--4701
171
8.9
171
80
5
1488
38
14
13
34
1.84
2604--3791
610
2.0
609
80
4
1385
39
13
11
35
1.81
3199--4701
343
4.4
342
80
5
1556
38
13
13
34
1.84
5809--11959
171
36.1
170
76
5
4946
38
13
12
34
1.83

Tables:   1

The End!