Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397500.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2529.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11770

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1742
171
10.2
171
76
5
1455
34
14
13
37
1.85
1949--2385
171
2.5
170
83
2
525
39
11
13
35
1.81
2722--6308
171
21.0
170
75
7
2317
37
12
13
34
1.83
5284--5316
16
2.1
16
88
11
50
66
6
0
27
1.15
7623--8212
320
1.8
320
79
5
681
36
13
13
34
1.84
8209--8449
131
1.8
132
83
2
324
40
12
12
35
1.80
8322--11768
171
20.1
170
70
7
1488
35
12
13
33
1.83
8345--9867
510
3.0
505
80
5
1541
38
13
13
34
1.84
10019--11739
341
5.0
339
77
7
1601
37
13
13
34
1.85

Tables:   1

The End!