Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397501.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1724.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11758

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
351--678
170
2.0
161
82
5
315
36
10
14
35
1.80
1--4128
171
24.3
167
72
7
2278
36
10
13
35
1.79
5--4128
341
12.1
339
72
7
1428
36
10
13
35
1.79
1--4128
682
6.1
677
74
7
1786
36
10
13
35
1.79
979--3784
512
5.5
508
76
5
2104
37
10
13
35
1.78
1311--4127
512
5.5
506
75
6
1901
36
10
13
35
1.79
4412--5646
170
7.3
170
71
5
730
35
14
9
36
1.78
4557--5560
510
2.0
495
79
3
964
35
13
9
36
1.76
7502--9317
172
10.6
169
74
6
1227
34
12
11
37
1.80
7983--9312
515
2.6
515
77
3
1189
34
12
12
37
1.81
9909--10282
171
2.2
170
84
3
475
34
13
11
40
1.81

Tables:   1

The End!