Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399734.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2978.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6967

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--725
171
4.2
171
84
2
876
36
12
12
39
1.80
6--737
342
2.1
341
85
1
975
36
12
12
38
1.81
781--1265
262
1.9
258
83
5
636
35
13
10
40
1.80
1029--1979
171
5.6
169
81
3
953
36
12
10
40
1.78
1022--1980
341
2.8
340
84
2
1140
36
12
10
39
1.79
2080--2590
171
3.0
169
82
4
560
35
12
11
39
1.79
2695--4062
171
8.0
171
72
4
808
37
11
12
34
1.79
4547--5012
171
2.7
171
80
3
501
36
12
13
35
1.82
5181--6659
170
8.7
170
73
7
849
37
11
12
34
1.78
5225--6659
341
4.2
343
74
5
849
37
10
12
34
1.78

Tables:   1

The End!