Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397503.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2204.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11612

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1581
171
9.3
170
75
3
1096
35
12
11
37
1.79
3045--11612
171
49.7
171
69
8
2894
35
13
11
36
1.81
5453--6530
596
1.8
597
82
1
1383
35
15
11
34
1.83
5936--11612
342
16.6
342
74
4
3786
35
13
12
35
1.82
9902--11587
856
2.0
845
78
1
1703
35
13
12
35
1.82

Tables:   1

The End!