Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399757.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_300.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9378

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
647--1098
171
2.6
171
77
7
468
37
12
11
38
1.81
2306--3240
170
5.5
168
75
7
596
35
13
9
37
1.78
5643--6149
170
3.0
168
78
7
499
40
10
11
35
1.76
6753--7363
170
3.6
167
74
9
479
35
12
14
34
1.83
7548--8424
170
5.1
167
78
7
786
39
11
14
33
1.83
7548--8409
341
2.5
339
79
7
947
39
11
14
33
1.83

Tables:   1

The End!