Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397504.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2025.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11448

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1889--2727
171
4.9
170
76
6
716
34
12
12
39
1.81
2731--4288
171
9.1
166
75
8
1069
34
12
12
40
1.81
2826--4270
516
2.8
503
78
8
1308
33
13
12
40
1.82
4550--10220
171
33.3
170
76
5
4426
35
12
12
39
1.81
4550--10220
341
16.6
339
78
6
4732
35
12
12
39
1.81
9993--10466
240
2.0
239
83
1
590
33
10
13
41
1.79
10224--11448
171
7.1
168
75
7
838
35
12
12
38
1.81
10385--11151
175
4.4
171
79
7
680
35
12
12
39
1.81

Tables:   1

The End!