Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399771.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3012.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5342

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
295--719
169
2.5
169
80
5
511
38
12
13
35
1.83
1252--1575
172
1.9
172
82
7
408
39
12
12
35
1.81
1676--4755
171
18.1
170
77
6
2543
39
14
13
32
1.85
1676--4755
341
9.0
339
77
6
2728
39
14
13
32
1.85
1683--4747
853
3.6
844
79
6
3032
39
14
13
32
1.85
1689--4755
682
4.5
681
81
4
3119
39
14
13
32
1.85
4967--5342
170
2.2
170
82
1
441
42
13
14
29
1.84

Tables:   1

The End!