Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399793.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3034.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6200

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1930
171
11.3
169
78
5
1671
38
12
13
33
1.82
1--5467
512
10.6
510
72
7
2353
37
12
13
33
1.82
2072--2688
170
3.6
169
77
5
573
38
12
13
35
1.83
2666--2715
21
2.4
21
93
0
82
16
22
14
48
1.81
2687--5457
171
16.3
171
76
4
2003
37
12
13
34
1.83
5341--5592
125
2.0
125
79
6
269
33
16
17
32
1.93
5170--6027
296
2.9
293
78
7
760
35
14
14
34
1.87
5475--6040
307
1.8
307
84
3
773
34
14
14
36
1.86
5648--5930
136
2.1
136
80
4
302
33
14
15
37
1.88
5782--6200
171
2.4
170
82
5
486
36
13
15
34
1.87

Tables:   1

The End!