Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397510.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_874.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11107

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1878--1907
15
1.9
16
93
6
53
33
6
6
53
1.53
1845--2217
172
2.2
170
82
1
433
35
12
11
39
1.80
2911--3733
171
4.8
171
72
8
550
35
12
11
39
1.79
3898--6625
171
16.0
170
75
7
1855
35
13
12
39
1.81
3897--6625
341
8.0
338
77
7
1880
35
13
12
39
1.81
8689--10604
171
11.3
171
73
7
1036
39
11
13
35
1.80
8663--10604
342
5.7
340
75
8
1219
39
10
13
35
1.80
8689--10128
513
2.8
506
78
6
1294
39
11
13
35
1.80

Tables:   1

The End!