Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397511.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_663.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11076

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--541
170
2.0
160
79
10
348
37
14
10
34
1.81
110--1227
171
6.6
165
73
6
605
34
13
11
35
1.81
1789--3389
171
9.4
170
75
5
1207
37
11
12
35
1.81
1793--3179
509
2.7
501
79
7
1162
37
12
12
35
1.81
3787--7634
171
22.6
170
74
7
2153
37
11
12
34
1.81
3821--7634
511
7.5
502
74
7
2072
37
11
12
34
1.80
3787--7634
340
11.3
341
74
5
2583
37
11
12
34
1.81
7776--8128
168
2.1
169
83
8
452
39
11
11
37
1.78
8320--9050
171
4.3
172
77
4
629
38
11
12
34
1.80
9180--10377
171
7.0
172
75
4
963
36
11
13
36
1.81
9180--10377
343
3.5
341
81
2
1283
36
11
13
36
1.81
10729--11049
171
1.9
171
85
3
450
33
13
16
36
1.87

Tables:   1

The End!