Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397513.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1559.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10969

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1232--1847
171
3.7
166
78
8
601
37
13
12
36
1.82
1230--1842
331
1.9
331
83
3
822
37
13
12
36
1.82
1546--1964
170
2.5
169
78
5
416
36
10
12
36
1.79
2146--6320
172
24.5
170
73
8
1643
34
13
11
37
1.81
2149--6091
342
11.6
329
73
8
1358
35
13
11
37
1.81
4769--5101
171
2.0
160
76
14
230
35
12
11
37
1.80
6768--8340
171
9.1
168
72
6
644
35
13
10
35
1.79
9061--10226
171
6.8
168
70
6
606
35
12
10
35
1.77
10596--10967
172
2.2
172
79
5
387
33
15
11
39
1.83

Tables:   1

The End!