Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399873.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3107.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5043

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--1428
171
4.7
169
75
5
620
34
13
11
37
1.81
633--1952
170
7.8
168
69
7
586
33
13
12
36
1.82
633--1428
341
2.3
338
79
5
780
34
13
11
37
1.81
2276--2674
171
2.4
167
80
7
450
40
12
12
34
1.81
3052--3090
20
2.1
19
86
13
55
35
12
5
46
1.65
3183--3553
171
2.2
170
83
2
458
39
12
14
34
1.83
3183--3579
170
2.3
171
83
3
478
38
12
14
34
1.84

Tables:   1

The End!