Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397517.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1645.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10512

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--323
170
1.9
172
83
1
417
34
15
12
38
1.85
2537--2909
172
2.2
171
82
6
425
35
12
14
37
1.84
1956--3785
171
10.7
171
74
5
912
34
12
12
36
1.81
5263--5606
176
2.0
174
84
8
452
35
15
11
38
1.82
5263--5740
176
2.8
169
79
10
448
33
14
10
39
1.80
4958--6330
171
8.0
169
72
8
738
32
13
12
36
1.81
6515--9436
171
17.1
170
75
4
2099
34
13
11
36
1.81
6515--9436
514
5.7
513
77
4
2313
34
13
11
36
1.81
10063--10371
170
1.9
161
84
3
336
34
12
11
37
1.81

Tables:   1

The End!