Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399918.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3150.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7962

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3045
171
17.9
170
75
10
2305
34
13
12
39
1.82
1--3042
342
9.0
340
78
6
2734
34
13
12
39
1.82
3295--4036
171
4.3
171
80
4
626
34
14
11
38
1.82
4876--5301
171
2.5
162
82
6
474
31
14
12
36
1.83
5680--6357
172
4.0
172
80
6
700
36
13
10
39
1.80
5668--6357
344
2.0
342
83
5
867
36
13
10
39
1.80
6235--6507
150
1.8
151
84
5
374
33
10
11
44
1.75
6362--6681
172
1.9
172
84
3
430
34
13
12
40
1.81
6900--7522
170
3.7
170
77
4
499
32
14
12
39
1.83

Tables:   1

The End!