Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399925.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3156.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5901

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2513--2906
172
2.3
171
84
3
490
37
12
13
36
1.82
3361--4161
172
4.7
172
81
4
844
34
14
14
36
1.86
3361--4161
344
2.3
343
82
5
929
34
14
14
36
1.86
4701--5901
172
7.0
168
79
6
1137
36
11
14
37
1.83
4708--5901
516
2.3
513
81
5
1383
36
12
14
37
1.83

Tables:   1

The End!