Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397521.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_383.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10340

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--4091
172
23.5
170
74
7
2672
35
13
11
37
1.80
57--4090
343
11.8
343
75
7
2939
35
13
11
37
1.80
2486--3296
171
4.9
162
76
9
485
35
13
11
38
1.81
4291--5144
174
4.9
168
74
7
524
36
12
9
38
1.77
4677--5146
170
2.7
173
83
5
553
37
13
9
38
1.78
5912--7485
171
9.2
171
74
3
1157
34
13
10
37
1.80
7875--8511
173
3.7
169
73
7
514
36
13
10
37
1.80
9391--9759
168
2.2
167
90
1
576
35
12
14
38
1.83
10024--10340
171
1.8
172
83
3
415
35
13
13
38
1.84

Tables:   1

The End!