Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399951.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_318.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10635

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--3212
171
18.9
168
73
7
1966
35
13
11
37
1.82
59--2487
685
3.6
669
75
8
1884
35
14
11
37
1.83
1437--3212
510
3.5
498
76
8
1336
34
13
11
37
1.81
3470--3964
169
2.9
169
75
4
451
35
11
13
39
1.81
4068--5269
170
7.0
170
70
8
614
37
12
12
33
1.82
5982--6377
171
2.3
170
81
4
415
37
12
14
35
1.83
8090--9022
169
5.5
171
76
6
806
40
10
12
36
1.78
8113--9022
338
2.7
335
79
7
895
39
10
12
36
1.79
9703--10632
171
5.4
170
78
7
825
33
13
12
40
1.81
9701--10633
342
2.7
337
77
7
916
33
13
12
40
1.81

Tables:   1

The End!