Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397523.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2567.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10238

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1550--1963
170
2.4
169
73
6
386
35
9
13
38
1.77
3056--3757
170
4.1
169
73
6
505
37
9
13
35
1.78
4728--5396
170
3.9
169
76
5
541
37
10
13
36
1.79
5541--6941
170
8.2
169
76
4
1210
37
9
13
35
1.79
5541--7004
339
4.3
339
78
6
1320
36
10
13
35
1.79
4743--6261
799
1.9
798
80
1
1768
36
10
13
35
1.78
7020--10238
170
19.0
170
71
6
1841
37
10
13
34
1.78
6560--7464
460
2.0
460
81
2
1055
36
10
13
35
1.79
7020--10238
169
19.0
168
70
8
1373
37
10
13
34
1.78
6221--7732
799
1.9
798
79
4
1704
37
9
14
35
1.79
6052--7970
969
2.0
967
82
4
2359
37
10
14
35
1.79
7130--10237
509
6.1
505
72
7
1538
37
9
12
34
1.77

Tables:   1

The End!