Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399972.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_320.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32276

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1484--1863
169
2.2
169
79
5
374
35
15
11
35
1.83
7265--7823
171
3.3
167
77
5
568
33
14
11
37
1.82
14700--15739
172
6.1
168
71
9
660
35
13
10
36
1.80
13371--15739
171
13.9
170
67
7
716
33
13
10
35
1.79
16097--16526
169
2.5
169
81
7
478
37
11
9
41
1.73
18095--18463
168
2.2
171
81
7
430
38
13
9
38
1.77
18589--18908
171
1.9
162
82
3
322
35
14
10
36
1.81
18749--19073
172
2.0
157
78
10
319
32
12
11
36
1.80
20273--21096
172
4.8
170
76
4
526
37
10
13
36
1.79
19947--22017
171
12.1
170
71
5
913
35
10
13
34
1.79
27249--29085
171
10.7
171
76
5
1380
36
11
13
34
1.80
28263--29081
180
4.7
181
74
6
545
35
11
12
36
1.80
29448--29786
170
2.0
170
79
5
364
38
10
12
35
1.77
30053--30387
171
2.0
159
75
14
341
37
13
13
32
1.83
30402--30939
171
3.1
170
76
10
406
36
9
15
36
1.80
31326--31642
165
1.9
156
82
8
311
36
13
12
34
1.82

Tables:   1

The End!