Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397525.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_135.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10029

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1501--4646
171
18.4
169
73
7
1608
38
12
13
34
1.82
595--4646
855
4.8
838
80
4
3667
38
12
13
34
1.82
680--4646
171
23.3
171
72
8
1299
38
12
13
34
1.82
4667--5034
171
2.1
172
81
4
413
37
14
12
35
1.83
5855--6227
171
2.2
171
77
5
389
40
13
12
33
1.82
6424--10029
171
21.3
169
73
7
1801
38
11
13
33
1.81
7594--7908
169
1.9
161
86
7
365
38
12
11
34
1.80
6723--9946
341
9.5
338
72
8
1020
39
12
12
33
1.81

Tables:   1

The End!