Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397527.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3029.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10012

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--1589
171
2.4
170
83
4
513
36
12
10
40
1.78
2316--2819
171
2.9
168
78
5
492
34
12
13
39
1.82
2529--2911
171
2.2
171
81
5
416
33
15
12
37
1.86
3344--5054
171
10.0
171
75
4
1166
35
12
12
38
1.80
3110--5054
171
11.4
170
73
6
1148
34
12
12
38
1.81
3850--5054
340
3.5
334
78
7
1171
36
12
12
38
1.81
5363--6232
341
2.5
339
80
2
947
33
11
13
38
1.82
7197--8827
171
9.5
171
74
9
716
34
14
12
37
1.83
7424--8210
341
2.3
343
82
3
917
34
15
13
36
1.87
7424--8827
342
4.1
341
79
6
993
34
14
12
37
1.84
7197--8827
512
3.2
505
76
5
1454
34
14
12
37
1.83
9293--10012
171
4.2
172
73
2
561
33
11
13
37
1.80

Tables:   1

The End!